Isolation and identification of phytate-degrading rhizobacteria with activity of improving growth of poplar and Masson pine.
Identifieur interne : 002613 ( Main/Exploration ); précédent : 002612; suivant : 002614Isolation and identification of phytate-degrading rhizobacteria with activity of improving growth of poplar and Masson pine.
Auteurs : Gui-E Li [République populaire de Chine] ; Xiao-Qin Wu ; Jian-Ren Ye ; Liang Hou ; Ai-Dong Zhou ; Liu ZhaoSource :
- World journal of microbiology & biotechnology [ 1573-0972 ] ; 2013.
Descripteurs français
- KwdFr :
- ADN bactérien (génétique), ARN ribosomique 16S (génétique), Acide phytique (métabolisme), Chine (MeSH), Microbiologie du sol (MeSH), Phylogenèse (MeSH), Phytase (génétique), Phytase (métabolisme), Pinus (croissance et développement), Pinus (microbiologie), Populus (croissance et développement), Populus (microbiologie), Protéines bactériennes (génétique), Protéines bactériennes (métabolisme), Pseudomonas fluorescens (classification), Pseudomonas fluorescens (génétique), Pseudomonas fluorescens (isolement et purification), Pseudomonas fluorescens (métabolisme), Rahnella (classification), Rahnella (génétique), Rahnella (isolement et purification), Rahnella (métabolisme), Rhizosphère (MeSH), Sol (composition chimique), Sol (parasitologie), Symbiose (MeSH), Écosystème (MeSH).
- MESH :
- composition chimique : Pseudomonas fluorescens, Rahnella, Sol.
- croissance et développement : Pinus, Populus.
- génétique : ADN bactérien, ARN ribosomique 16S, Phytase, Protéines bactériennes, Pseudomonas fluorescens, Rahnella.
- isolement et purification : Pseudomonas fluorescens, Rahnella.
- microbiologie : Pinus, Populus.
- métabolisme : Acide phytique, Phytase, Protéines bactériennes, Pseudomonas fluorescens, Rahnella.
- parasitologie : Sol.
- Chine, Microbiologie du sol, Phylogenèse, Rhizosphère, Symbiose, Écosystème.
English descriptors
- KwdEn :
- 6-Phytase (genetics), 6-Phytase (metabolism), Bacterial Proteins (genetics), Bacterial Proteins (metabolism), China (MeSH), DNA, Bacterial (genetics), Ecosystem (MeSH), Phylogeny (MeSH), Phytic Acid (metabolism), Pinus (growth & development), Pinus (microbiology), Populus (growth & development), Populus (microbiology), Pseudomonas fluorescens (classification), Pseudomonas fluorescens (genetics), Pseudomonas fluorescens (isolation & purification), Pseudomonas fluorescens (metabolism), RNA, Ribosomal, 16S (genetics), Rahnella (classification), Rahnella (genetics), Rahnella (isolation & purification), Rahnella (metabolism), Rhizosphere (MeSH), Soil (chemistry), Soil (parasitology), Soil Microbiology (MeSH), Symbiosis (MeSH).
- MESH :
- chemical , chemistry : Soil.
- chemical , genetics : 6-Phytase, Bacterial Proteins, DNA, Bacterial, RNA, Ribosomal, 16S.
- chemical , metabolism : 6-Phytase, Bacterial Proteins, Phytic Acid.
- classification : Pseudomonas fluorescens, Rahnella.
- genetics : Pseudomonas fluorescens, Rahnella.
- growth & development : Pinus, Populus.
- isolation & purification : Pseudomonas fluorescens, Rahnella.
- metabolism : Pseudomonas fluorescens, Rahnella.
- microbiology : Pinus, Populus.
- chemical , parasitology : Soil.
- China, Ecosystem, Phylogeny, Rhizosphere, Soil Microbiology, Symbiosis.
Abstract
A number of soil microorganisms can convert insoluble forms of phosphorus (P) to an accessible form to increase plant yields. Phytate is such a large kind of insoluble organic phosphorus that plants cannot absorb directly in soil, so the objectives of this study were to isolate, screen phytate-degrading rhizobacteria (PDRB), and to select potential microbial inocula that could increase the P uptake by plants. In this study, a total of 24 soil samples were collected from natural habitats of eight poplar and pine planting areas from the eastern to southern China. 17 PDRB strains were preliminarily screened from the rhizosphere soil of poplars and pines by the visible decolorization in the phytate selective medium. The highest ratio of the total diameter (colony + halo zone) to the colony diameter of the isolates was JZ-GX1, 3.85. Afterward, 17 PDRB strains were further determined for their abilities to degrade sodium phytate based on the amount of liberated inorganic P in liquid phytate specific medium. The results showed that the phytase ability of the three highest PDRB strains: JZ-GX1, JZ-DZ1 and JZ-ZJ1 were up to 2.58, 2.36 and 2.24 U/mL, respectively, much better than most of the bacteria reported in previous studies. In the soil-plant experiment, compared to CK, the best three strains of PDRB all could significantly promote growth of poplar and Masson pine under container growing. The three efficient PDRB strains were identified as follow: JZ-GX1, Rahnella aquatilis, both JZ-DZ1 and JZ-ZJ1 being autofluorescent, Pseudomonas fluorescens, by 16S rDNA gene sequencing technology, Biolog Identification System and biological characterization. The present study suggests that the three screened PDRB strains would have great potential application as biological fertilizers in the future.
DOI: 10.1007/s11274-013-1384-3
PubMed: 23709169
Affiliations:
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Le document en format XML
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(MeSH)</term><term>Phytic Acid (metabolism)</term><term>Pinus (growth & development)</term><term>Pinus (microbiology)</term><term>Populus (growth & development)</term><term>Populus (microbiology)</term><term>Pseudomonas fluorescens (classification)</term><term>Pseudomonas fluorescens (genetics)</term><term>Pseudomonas fluorescens (isolation & purification)</term><term>Pseudomonas fluorescens (metabolism)</term><term>RNA, Ribosomal, 16S (genetics)</term><term>Rahnella (classification)</term><term>Rahnella (genetics)</term><term>Rahnella (isolation & purification)</term><term>Rahnella (metabolism)</term><term>Rhizosphere (MeSH)</term><term>Soil (chemistry)</term><term>Soil (parasitology)</term><term>Soil Microbiology (MeSH)</term><term>Symbiosis (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien (génétique)</term><term>ARN ribosomique 16S (génétique)</term><term>Acide phytique (métabolisme)</term><term>Chine (MeSH)</term><term>Microbiologie du sol (MeSH)</term><term>Phylogenèse (MeSH)</term><term>Phytase (génétique)</term><term>Phytase (métabolisme)</term><term>Pinus (croissance et développement)</term><term>Pinus (microbiologie)</term><term>Populus (croissance et développement)</term><term>Populus (microbiologie)</term><term>Protéines bactériennes (génétique)</term><term>Protéines bactériennes (métabolisme)</term><term>Pseudomonas fluorescens (classification)</term><term>Pseudomonas fluorescens (génétique)</term><term>Pseudomonas fluorescens (isolement et purification)</term><term>Pseudomonas fluorescens (métabolisme)</term><term>Rahnella (classification)</term><term>Rahnella (génétique)</term><term>Rahnella (isolement et purification)</term><term>Rahnella (métabolisme)</term><term>Rhizosphère (MeSH)</term><term>Sol (composition chimique)</term><term>Sol (parasitologie)</term><term>Symbiose (MeSH)</term><term>Écosystème (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" 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qualifier="métabolisme" xml:lang="fr"><term>Acide phytique</term><term>Phytase</term><term>Protéines bactériennes</term><term>Pseudomonas fluorescens</term><term>Rahnella</term></keywords><keywords scheme="MESH" qualifier="parasitologie" xml:lang="fr"><term>Sol</term></keywords><keywords scheme="MESH" type="chemical" qualifier="parasitology" xml:lang="en"><term>Soil</term></keywords><keywords scheme="MESH" xml:lang="en"><term>China</term><term>Ecosystem</term><term>Phylogeny</term><term>Rhizosphere</term><term>Soil Microbiology</term><term>Symbiosis</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Chine</term><term>Microbiologie du sol</term><term>Phylogenèse</term><term>Rhizosphère</term><term>Symbiose</term><term>Écosystème</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A number of soil microorganisms can convert insoluble forms of phosphorus (P) to an accessible form to increase plant yields. Phytate is such a large kind of insoluble organic phosphorus that plants cannot absorb directly in soil, so the objectives of this study were to isolate, screen phytate-degrading rhizobacteria (PDRB), and to select potential microbial inocula that could increase the P uptake by plants. In this study, a total of 24 soil samples were collected from natural habitats of eight poplar and pine planting areas from the eastern to southern China. 17 PDRB strains were preliminarily screened from the rhizosphere soil of poplars and pines by the visible decolorization in the phytate selective medium. The highest ratio of the total diameter (colony + halo zone) to the colony diameter of the isolates was JZ-GX1, 3.85. Afterward, 17 PDRB strains were further determined for their abilities to degrade sodium phytate based on the amount of liberated inorganic P in liquid phytate specific medium. The results showed that the phytase ability of the three highest PDRB strains: JZ-GX1, JZ-DZ1 and JZ-ZJ1 were up to 2.58, 2.36 and 2.24 U/mL, respectively, much better than most of the bacteria reported in previous studies. In the soil-plant experiment, compared to CK, the best three strains of PDRB all could significantly promote growth of poplar and Masson pine under container growing. The three efficient PDRB strains were identified as follow: JZ-GX1, Rahnella aquatilis, both JZ-DZ1 and JZ-ZJ1 being autofluorescent, Pseudomonas fluorescens, by 16S rDNA gene sequencing technology, Biolog Identification System and biological characterization. The present study suggests that the three screened PDRB strains would have great potential application as biological fertilizers in the future.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">23709169</PMID><DateCompleted><Year>2014</Year><Month>05</Month><Day>01</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1573-0972</ISSN><JournalIssue CitedMedium="Internet"><Volume>29</Volume><Issue>11</Issue><PubDate><Year>2013</Year><Month>Nov</Month></PubDate></JournalIssue><Title>World journal of microbiology & biotechnology</Title><ISOAbbreviation>World J Microbiol Biotechnol</ISOAbbreviation></Journal><ArticleTitle>Isolation and identification of phytate-degrading rhizobacteria with activity of improving growth of poplar and Masson pine.</ArticleTitle><Pagination><MedlinePgn>2181-93</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s11274-013-1384-3</ELocationID><Abstract><AbstractText>A number of soil microorganisms can convert insoluble forms of phosphorus (P) to an accessible form to increase plant yields. Phytate is such a large kind of insoluble organic phosphorus that plants cannot absorb directly in soil, so the objectives of this study were to isolate, screen phytate-degrading rhizobacteria (PDRB), and to select potential microbial inocula that could increase the P uptake by plants. In this study, a total of 24 soil samples were collected from natural habitats of eight poplar and pine planting areas from the eastern to southern China. 17 PDRB strains were preliminarily screened from the rhizosphere soil of poplars and pines by the visible decolorization in the phytate selective medium. The highest ratio of the total diameter (colony + halo zone) to the colony diameter of the isolates was JZ-GX1, 3.85. Afterward, 17 PDRB strains were further determined for their abilities to degrade sodium phytate based on the amount of liberated inorganic P in liquid phytate specific medium. The results showed that the phytase ability of the three highest PDRB strains: JZ-GX1, JZ-DZ1 and JZ-ZJ1 were up to 2.58, 2.36 and 2.24 U/mL, respectively, much better than most of the bacteria reported in previous studies. In the soil-plant experiment, compared to CK, the best three strains of PDRB all could significantly promote growth of poplar and Masson pine under container growing. The three efficient PDRB strains were identified as follow: JZ-GX1, Rahnella aquatilis, both JZ-DZ1 and JZ-ZJ1 being autofluorescent, Pseudomonas fluorescens, by 16S rDNA gene sequencing technology, Biolog Identification System and biological characterization. The present study suggests that the three screened PDRB strains would have great potential application as biological fertilizers in the future.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Li</LastName><ForeName>Gui-E</ForeName><Initials>GE</Initials><AffiliationInfo><Affiliation>Institute of Forest Protection, College of Forest Resources and Environment, Nanjing Forestry University, Nanjing, China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wu</LastName><ForeName>Xiao-Qin</ForeName><Initials>XQ</Initials></Author><Author ValidYN="Y"><LastName>Ye</LastName><ForeName>Jian-Ren</ForeName><Initials>JR</Initials></Author><Author ValidYN="Y"><LastName>Hou</LastName><ForeName>Liang</ForeName><Initials>L</Initials></Author><Author ValidYN="Y"><LastName>Zhou</LastName><ForeName>Ai-Dong</ForeName><Initials>AD</Initials></Author><Author ValidYN="Y"><LastName>Zhao</LastName><ForeName>Liu</ForeName><Initials>L</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2013</Year><Month>05</Month><Day>25</Day></ArticleDate></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>World J Microbiol Biotechnol</MedlineTA><NlmUniqueID>9012472</NlmUniqueID><ISSNLinking>0959-3993</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D001426">Bacterial Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004269">DNA, Bacterial</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012336">RNA, Ribosomal, 16S</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012987">Soil</NameOfSubstance></Chemical><Chemical><RegistryNumber>7IGF0S7R8I</RegistryNumber><NameOfSubstance UI="D010833">Phytic Acid</NameOfSubstance></Chemical><Chemical><RegistryNumber>EC 3.1.3.26</RegistryNumber><NameOfSubstance UI="D010832">6-Phytase</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D010832" MajorTopicYN="N">6-Phytase</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D001426" MajorTopicYN="N">Bacterial Proteins</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002681" MajorTopicYN="N">China</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004269" MajorTopicYN="N">DNA, Bacterial</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017753" MajorTopicYN="N">Ecosystem</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010833" MajorTopicYN="N">Phytic Acid</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D028223" MajorTopicYN="N">Pinus</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011551" MajorTopicYN="N">Pseudomonas fluorescens</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012336" MajorTopicYN="N">RNA, Ribosomal, 16S</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020638" MajorTopicYN="N">Rahnella</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D058441" MajorTopicYN="N">Rhizosphere</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D012987" MajorTopicYN="N">Soil</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName><QualifierName UI="Q000469" MajorTopicYN="N">parasitology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012988" MajorTopicYN="N">Soil Microbiology</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013559" MajorTopicYN="N">Symbiosis</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2013</Year><Month>03</Month><Day>15</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2013</Year><Month>05</Month><Day>20</Day></PubMedPubDate><PubMedPubDate 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sort="Li, Gui E" uniqKey="Li G" first="Gui-E" last="Li">Gui-E Li</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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